update citations for AJP

mostly done.

editing/AmJPhys_SampleManuscript-2/SampleAnonymous.tex

@@ -565,8 +565,13 @@ another equation before Eq.~(\ref{deriv}).
 
 \bibitem{footnotes} You need to process a file twice to get the counters correct.
 
-\bibitem{mermin} N. David Mermin, ``What's wrong with these equations?,'' 
-Phys. Today \textbf{42} (10), 9--11 (1989).  
+\bibitem{mermin} 
+N. David Mermin, 
+``What's wrong with these equations?,'' 
+Phys. Today 
+\textbf{42} (10), 
+9--11 (1989).  
+
 % Note that the issue number (10) in this citation is required, because
 % each issue of Physics Today starts over with page 1.  Also note the use of
 % an en-dash (--), not a hyphen (-), for the page range.

food_energy.tex

@@ -36,7 +36,7 @@
 %When submitting the manuscript for review, do not include the author's name or institution
 \author{Nathan T. Moore}
 \email{nmoore@winona.edu}
-\affiliation{Physics and General Engineering, Winona State University, Winona, MN 55987}
+\affiliation{Physics, Winona State University, Winona, MN 55987}
 
 %IOP header
 %%\title[How many acres of potatoes does a society need?]{How many acres of potatoes does a society need?}
@@ -379,29 +379,23 @@ Three screen captures showing chinampa areas and the calibration stick used to c
 \begin{thebibliography}{99}
 
 \bibitem{Energy_textbook}
-Kraushaar JJ, Ristinen RA, Brack JT.
-Energy and the Environment. 4th edition.
-%Jack J. Kraushaar , Robert A. Ristinen , Jeffrey T. Brack
-Wiley; 2022.
+Jack J. Kraushaar, Robert A. Ristinen, and Jeffrey T. Brack,
+\textit{Energy and the Environment}, 
+4th edition
+(Wiley, 2022).
 
 \bibitem{PFFP}
-Muller RA.
-Physics and Technology for Future Presidents: An Introduction to the Essential Physics Every World Leader Needs to Know
-%Richard A. Muller
-Princeton University Press; 2010.
+Richard A. Muller.
+\textit{Physics and Technology for Future Presidents: An Introduction to the Essential Physics Every World Leader Needs to Know},
+(Princeton University Press, 2010).
 
 \bibitem{meat_sweats}
 %https://www.bonappetit.com/story/meat-sweats
-Trayhurn P.
-Thermogenesis.
-In: Caballero B, editor.
-%THERMOGENESIS,
-%Editor(s): Benjamin Caballero,
-Encyclopedia of Food Sciences and Nutrition. 2nd ed.
-% (Second Edition),
-Academic Press;
-2003.
-pp. 5762-7.
+P. Trayhurn,
+``Thermogenesis,''
+in \textit{Encyclopedia of Food Sciences and Nutrition. 2nd ed.},
+edited by Benjamin Caballero 
+(Academic Press, 2003), pp. 5762-7.
 %ISBN 9780122270550,
 %https://doi.org/10.1016/B0-12-227055-X/01188-3.
 %(https://www.sciencedirect.com/science/article/pii/B012227055X011883)
@@ -411,7 +405,7 @@ The wilderness river might be full of trout, but if they're $300kcals$ each, you
 U.S. Department of Agriculture Agricultural Research Service [Internet].
 FoodData Central: Fish, trout, rainbow, wild, raw.
 [updated 2019 Apr 1, cited 2023 Jan 16]; [about 3 screens].
-Available from: \url{https://fdc.nal.usda.gov/fdc-app.html#/food-details/175154/nutrients}
+Available from: \url{<https://fdc.nal.usda.gov/fdc-app.html#/food-details/175154/nutrients>}
 
 \bibitem{fat_bear}
 Some sources claim that bear metabolism can vary between $4,000$ to $20,000$ kcals per day, 
@@ -419,76 +413,77 @@ North American Bear Center [Internet].
 Ely, MN, USA 2023. 
 5 Stages of Activity and Hibernation.
 [cited 2023 Jan 16]; [about 2 screens].
-Available from: \url{https://bear.org/5-stages-of-activity-and-hibernation/}.
+Available from: \url{<https://bear.org/5-stages-of-activity-and-hibernation/>}.
 %
 This is comically illustrated by the National Park Service at 
 National Park Service, Katmai National Park and Preserve Alaska [Internet].
 Fat Bear Week 2022.
 [updated 2022 Oct 11, cited 2023 Jan 16]; [about 5 screens].
-Available from: \url{https://www.nps.gov/katm/learn/fat-bear-week-2022.htm} .
+Available from: \url{<https://www.nps.gov/katm/learn/fat-bear-week-2022.htm>} .
 
 
 \bibitem{brown_fat_1}
-Cohen P, Spiegelman BM.
-Brown and beige fat: molecular parts of a thermogenic machine.
+Paul Cohen and Bruce M. Spiegelman,
+``Brown and beige fat: molecular parts of a thermogenic machine,''
 %Paul Cohen1 and Bruce M. Spiegelman2
-Diabetes.
-2015;
-64:2346–51
+Diabetes
+\textbf{64},
+2346-–51
+(2015).
 % | DOI: 10.2337/db15-0318
 
 \bibitem{brown_fat_2}
 %https://pubmed.ncbi.nlm.nih.gov/33846638/
-Shamsi F, Piper M, Ho LL, Huang TL, Gupta A, Streets A, Lynes MD, Tseng YH. 
-Vascular smooth muscle-derived Trpv1+ progenitors are a source of cold-induced thermogenic adipocytes. 
+Farnaz Shamsi, Mary Piper, Li-Lun Ho, Tian Lian Huang, Anushka Gupta, Aaron Streets, Matthew D. Lynes, and Yu-Hua Tseng, 
+``Vascular smooth muscle-derived Trpv1+ progenitors are a source of cold-induced thermogenic adipocytes,''
 Nat Metab.
-2021 Apr;3(4):485-95.
+\textbf{3}, 485-95 (2021).
 %doi: 10.1038/s42255-021-00373-z. Epub 2021 Apr 12. PMID: 33846638; PMCID: PMC8076094.
 
 \bibitem{brown_fat_3}
 %https://pubmed.ncbi.nlm.nih.gov/14715917/
-Cannon B, Brown NJ. 
-Adipose tissue: function and physiological significance.
+Barbara Cannon and Jan Nedergaard,
+``Adipose tissue: function and physiological significance,''
 Physiol Rev. 
-2004 Jan;
-84(1):277-359. 
+\textbf{84} (1), 
+277--359 (2004). 
 %doi: 10.1152/physrev.00015.2003. PMID: 14715917.
 
 \bibitem{brown_fat_4}
 %https://pubmed.ncbi.nlm.nih.gov/6722594/
-Himms-Hagen J. 
-Nonshivering thermogenesis. 
+J. Himms-Hagen,
+``Nonshivering thermogenesis,'' 
 Brain Res Bull. 
-1984 Feb;
-12(2):151-60. 
+\textbf{12} (2),
+151--60 (1984). 
 %doi: 10.1016/0361-9230(84)90183-7. PMID: 6722594.
 %https://www.nih.gov/news-events/nih-research-matters/uncovering-origins-brown-fat
 
 \bibitem{finland_lumberjacks}
-Huttunen P, Hirvonen J, Kinnula V. 
-The occurrence of brown adipose tissue in outdoor workers. 
+P. Huttunen, J. Hirvonen, and V. Kinnula, 
+``The occurrence of brown adipose tissue in outdoor workers,''
 Eur J Appl Physiol Occup Physiol. 
-1981;
-46(4):339-45. 
+\textbf{46} (4), 339--45. 
+(1981).
 %doi: 10.1007/BF00422121. PMID: 6266825.
 
 \bibitem{METS}
-Jetté M, Sidney K, Blümchen G. 
-Metabolic equivalents (METS) in exercise testing, exercise prescription, and evaluation of functional capacity. 
+M. Jetté, K. Sidney, G. Blümchen, 
+``Metabolic equivalents (METS) in exercise testing, exercise prescription, and evaluation of functional capacity,'' 
 Clin Cardiol. 
-1990 Aug;
-13(8):555-65. 
+\textbf{13} (8), 555--65. 
+(1990).
 %doi: 10.1002/clc.4960130809. PMID: 2204507.
 
 \bibitem{energy_bar_charts}
-Brewe E.
-Energy as a substancelike quantity that flows: Theoretical considerations
-and pedagogical consequences.
+Eric Brewe,
+``Energy as a substancelike quantity that flows: Theoretical considerations
+and pedagogical consequences,''
 %Eric Brewe
 Phys. Rev. Phys. Edu. Res.
 %PHYSICAL REVIEW SPECIAL TOPICS - PHYSICS EDUCATION RESEARCH 
-2011; 
-7, 020106.
+\textbf{7}, 020106
+(2011). 
 %https://journals.aps.org/prper/abstract/10.1103/PhysRevSTPER.7.020106
 
 \bibitem{homesteading}
@@ -497,200 +492,192 @@ See for example, the Discover television show, ``Alaska the Last Frontier,'' any
  
  \bibitem{Haspel}
 Haspel T.
-In defense of corn, the world’s most important food crop.
+``In defense of corn, the world’s most important food crop,''
 The Washington Post [Internet].
 %Tamar Haspel 
 2015 July 12 [cited 2023 Jan 16].
-Available from \url{https://www.washingtonpost.com/lifestyle/food/in-defense-of-corn-the-worlds-most-important-food-crop/2015/07/12/78d86530-25a8-11e5-b77f-eb13a215f593_story.html}
+Available from \url{<https://www.washingtonpost.com/lifestyle/food/in-defense-of-corn-the-worlds-most-important-food-crop/2015/07/12/78d86530-25a8-11e5-b77f-eb13a215f593_story.html>}
 
 \bibitem{backyard_homestead}
-Madigan C. 
-The Backyard Homestead: Produce all the food you need on just a quarter acre!
+Carleen Madigan, 
+\textit{The Backyard Homestead: Produce all the food you need on just a quarter acre!},
 %Carleen Madigan
-Storey Publishing; 
-2009.
-
+(Storey Publishing, 2009).
 
 
 \bibitem{USDA_1917_yields_pamphlet}
-Cooper MO, Spillman WJ.
-Human Food from an Acre of Staple Farm Products.
+Morgan O. Cooper and W.J. Spillman,
+``Human Food from an Acre of Staple Farm Products,''
+Farmers' Bulletin 877,
 %Morton O. Cooper and W.J. Spillman
-Government Printing Office, United States Department of Agriculture
-October 1917.
-11 p.
-Farmers' Bulletin 877.
-
+(Government Printing Office, United States Department of Agriculture,
+October 1917)
 
 \bibitem{math_encounters}
-
 Math Encounters Blog [Internet].
 Mark Biegert, 2022.
 Calorie Per Acre Improvements in Staple Crops Over Time;
 2017 Jan 4: [cited 2023 Jan 16]; [about 5 screens].
-Available from: \url{https://www.mathscinotes.com/2017/01/calorie-per-acre-improvements-in-staple-crops-over-time/}
+Available from: \url{<https://www.mathscinotes.com/2017/01/calorie-per-acre-improvements-in-staple-crops-over-time/>}
 
 
 
 \bibitem{energetic_cost_of_moving}
 See the family groupings in figure 2 of 
-Tucker VA.
-The Energetic Cost of Moving About.
-American Scientist.
-1975; 
-63: 413-9.
+V. A. Tucker,
+``The Energetic Cost of Moving About,''
+American Scientist \textbf{63}, 
+ 413--9 (1975).
 
 \bibitem{calorie_age} 
 Is $3000\frac{kcal}{person\cdot day}$ accurate for a family?  For soldiers or active athletes it is, but $2000kcal$ is the USDA reference for an ``average adult,'' e.g. the author, in his 40's, and   $1000-1200kcal$ for a senior age ($>60$) female.  However, weeding the garden all day is physically taxing, mice will probably eat some of the potatoes, and $3000$ is a nice round number, so that's what I'm using.
 
 \bibitem{Deppe}
 Carol Deppe.
-The 20 Potato a Day Diet versus the Nearly All Potato Winter [Internet].
+``The 20 Potato a Day Diet versus the Nearly All Potato Winter'' [Internet].
 [cited 2023 Jan 16]; [about 5 screens].
 Available from: 
-\url{https://www.caroldeppe.com/The\%2020\%20Potato\%20a\%20Day\%20Diet.html}
+\url{<https://www.caroldeppe.com/The\%2020\%20Potato\%20a\%20Day\%20Diet.html>}
 
 
 \bibitem{organic_corn_yield}
 %This is an old article 
 %1998%
-Delate K, Cambardella C, Burcham B.
-Comparison of Organic and Conventional Corn, 
-Soybean, Alfalfa, Oats, And Rye Crops at the Neely Kinyon Long-Term Agroecological Research (LTAR) Site.
-1998.
-Available from: \url{http://extension.agron.iastate.edu/organicag/researchreports/n-kltar98.pdf} 
+Kathleen Delate, Cynthia Cambardella, and Bob Burcham,
+``Comparison of Organic and Conventional Corn, 
+Soybean, Alfalfa, Oats, And Rye Crops at the Neely Kinyon Long-Term Agroecological Research (LTAR) Site,''
+(1998).
+Available from: \url{<http://extension.agron.iastate.edu/organicag/researchreports/n-kltar98.pdf>} 
 %Dr. Kathleen Delate, assistant professor, Depts. of Horticulture \& Agronomy 
 %Dr. Cynthia Cambardella, soil scientist, USDA National Soil Tilth Lab 
 %Bob Burcham, farm superintendent, Neely-Kinyon Research and Demonstration Farm
 
 \bibitem{national_geo}
-Borunda A, Rodriguez C.
-In Mexico City, the pandemic revived Aztec-era island farms.
-National Geographic [Internet].
-2022 Jun 30.
-Available from \url{https://www.nationalgeographic.com/magazine/article/in-mexico-city-the-pandemic-revived-aztec-era-island-farms}
+Alejandra A. Borunda A, Cesar C Rodriguez,
+``In Mexico City, the pandemic revived Aztec-era island farms,''
+National Geographic,''
+(Jun 30 2022).
+Available from \url{<https://www.nationalgeographic.com/magazine/article/in-mexico-city-the-pandemic-revived-aztec-era-island-farms>}
 %ALEJANDRA BORUNDA A
 %CÉSAR RODRÍGUEZ C
 
 \bibitem{HortTech_2019}
-Ebel R.
-Chinampas: An Urban Farming Model of the Aztecs and a Potential Solution for Modern Megalopolis.
+Roland Ebel,
+``Chinampas: An Urban Farming Model of the Aztecs and a Potential Solution for Modern Megalopolis,''
 HortTechnology.
 %Roland Ebel
 %Volume/Issue: Volume 30: Issue 1
-2019; 
-30(1): 13-19
+\textbf{30} (1), 13--19
+(2019). 
 %DOI: https://doi.org/10.21273/HORTTECH04310-19
 
 \bibitem{Chinampas_1964}
-Coe MD
-The chinampas of Mexico.
+Michael D. Coe,
+``The Chinampas of Mexico,''
 %THE CHINAMPAS OF MEXICO
 %Author(s): Michael D. Coe
-Scientific American.
-1964 July; 211(1):90-9.
+Scientific American
+\textbf{211} (1), 90--9
+(July 1964).
 %Source: Scientific American , Vol. 211, No. 1 (July 1964), pp. 90-99
 %Published by: Scientific American, a division of Nature America, Inc.
 %Stable URL: https://www.jstor.org/stable/10.2307/24931564
+Available online at \url{<https://www.jstor.org/stable/10.2307/24931564>}
 
 \bibitem{google_earth}
-Chinampas are still visible in sattelite imagery.  See for example latitude = 19.268, longitude -99.087
+Chinampas are still visible in sattelite imagery.  See for example $latitude=19.268$, $longitude=-99.087$.
 
 \bibitem{40k}
 %Susan Toby Evans. 
-Evans ST.
-Ancient Mexico and Central America: Archaeology and Culture History. 
-Thames \& Hudson; 
-2013. 
-p 549.
+Susan T. Evans,
+\textit{Ancient Mexico and Central America: Archaeology and Culture History}
+(Thames \& Hudson, 2013), p 549.
 
 \bibitem{400k}
 Britannica [Internet].
-Tenochtitlán;
+\textit{Tenochtitlán},
 [updated 2022 Dec 23; cited 16 January 2023]; [about 1 screen].
-Available from: \url{https://www.britannica.com/place/Tenochtitlan}
+Available from: \url{<https://www.britannica.com/place/Tenochtitlan>}
 
 \bibitem{Aztec_Cannibalism} 
-Ortiz de Montellano BR.
-Aztec Cannibalism: An Ecological Necessity?
+Bernard R. Ortiz de Montellano,
+``Aztec Cannibalism: An Ecological Necessity?,''
 %Bernard R. Ortiz de Montellano
-Science.
-1978 May 12; 
-200(4342):611-7.
+Science 
+\textbf{200} (4342), 611-7
+(May 12 1978).
 %American Association for the Advancement of Science
-%https://www.jstor.org/stable/1746929
+Available online at \url{<https://www.jstor.org/stable/1746929>}.
 
 \bibitem{chinampas_wikipedia}
 Wikimedia Commons, the free media repository [Internet].
 File:Lake Texcoco c 1519.png;
 [updated 2016 Aug 17; cited 2023 Jan 16]; [about 1 screen].
-Available from: \url{https://commons.wikimedia.org/wiki/File:Lake\_Texcoco\_c\_1519.png}
+Available from: \url{<https://commons.wikimedia.org/wiki/File:Lake\_Texcoco\_c\_1519.png>}
 %Self-published work by Wikipedia user Madman2001
 
 
 \bibitem{imageJ}
-ImageJ is a free tool for measurement of photographic data.  
-\url{https://imagej.nih.gov/ij/}
-Schneider, C. A., Rasband, W. S., Eliceiri, K. W. 
-NIH Image to ImageJ: 25 years of image analysis. 
+ImageJ is a free tool for measurement of photographic data, 
+available at \url{<https://imagej.nih.gov/ij/>}.
+%
+Caroline A. Schneider, Wayne S. Rasband, Kevin W. Eliceiri,
+\textit{NIH Image to ImageJ: 25 years of image analysis},
 Nature Methods. 
-2012; 
-9(7):671-5. 
+\textbf{9} (7), 671-5 
+(2012).
 %doi:10.1038/nmeth.2089
 
 \bibitem{potato}
-Salaman RN, Hawkes JG.
-The History and Social Influence of the Potato
+Redcliffe N. Salaman and J. G. Hawkes,
+\textit{The History and Social Influence of the Potato},
 %Redcliffe N. Salaman  (Author), J. G. Hawkes (Editor)
-Cambridge University Press; 
-1985.
+(Cambridge University Press, 1985).
 
 \bibitem{little_ice_age}
-Fagan B.
-The Little Ice Age: How Climate Made History 1300-1850
-%Brian Fagan
-Basic Books 
-2001.
+Brian Fagan,
+\textit{The Little Ice Age: How Climate Made History 1300-1850},
+(Basic Books, 2001).
 
 \bibitem{IRE_area}
 Currently, Northern Ireland and the Republic of Ireland are separate countries.  Together, their land area is about $84,400km^2$.
 
 \bibitem{Ireland_5M}
-Carroll R.
-Ireland’s population passes 5m for first time since C19th famine.
-The Guardian [Internet].
-2021 Aug 31 [cited 2023 Jan 16].
+R. Carroll,
+``Ireland’s population passes 5m for first time since C19th famine,''
+The Guardian [Internet]
+(Aug 31 2021).
 %Tue 31 Aug 2021 10.19 EDT
 %© 2023 Guardian News & Media Limited or its affiliated companies. 
-Available from: \url{https://www.theguardian.com/world/2021/aug/31/ireland-population-surpasses-5m-for-first-time-since-1851}
+Available from: \url{<https://www.theguardian.com/world/2021/aug/31/ireland-population-surpasses-5m-for-first-time-since-1851>}
 
 \bibitem{pop_image}
 Wikimedia Commons, the free media repository [Internet].
 File:Population of the island of Ireland since 1600.png;
 [updated 2010 Jan 13; cited 2023 Jan 16]; [about 1 screen].
-Available from: \url{https://commons.wikimedia.org/wiki/File:Population\_of\_Ireland\_since\_1600.png}
+Available from: \url{<https://commons.wikimedia.org/wiki/File:Population\_of\_Ireland\_since\_1600.png>}
 
 \bibitem{pop_sources}
 Specific census data sources for the Ireland population plot are given at the ``talk'' page of \cite{pop_image}, specifically
-\url{https://commons.wikimedia.org/wiki/File\_talk:Population\_of\_Ireland\_since\_1600.png}
+\url{<https://commons.wikimedia.org/wiki/File\_talk:Population\_of\_Ireland\_since\_1600.png>}
 
 \bibitem{arable_percentage}
 The web suggests that $64\%$ of the land area in Ireland is currently suitable for agriculture.  Urbanization over the last 150 years has probably decreased this percentage.  
 Ask about Ireland [Internet].
 Land Use in Ireland; [cited 2023 Jan 16]; [about 2 screens].
-Available from: \url{https://www.askaboutireland.ie/enfo/sustainable-living/farming-in-ireland-overvi/land-use-in-ireland/}
+Available from: \url{<https://www.askaboutireland.ie/enfo/sustainable-living/farming-in-ireland-overvi/land-use-in-ireland/>}
 
 \bibitem{USDA_NASS}
 United States Department of Agriculture National Agricultural Statistics Service [Internet].
 Statistics by Subject; 
 [updated 2020 Oct 13; cited 2023 Jan 18]; [about 1 screen].
-Available from: \url{https://www.nass.usda.gov/Statistics_by_Subject/index.php?sector=CROPS}.  
+Available from: \url{<https://www.nass.usda.gov/Statistics_by_Subject/index.php?sector=CROPS>}.  
 
 \bibitem{USDA_FDC}
 United States Department of Agriculture Agricultural Research Service [Internet].
 FoodData Central; 
 [cited 2023 Jan 18]; [about 1 screen].
-Available from: \url{https://fdc.nal.usda.gov/fdc-app.html}.  
+Available from: \url{<https://fdc.nal.usda.gov/fdc-app.html>}.  
 
 
 \end{thebibliography}